STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVG0222877TVG0222877 protein. (409 aa)    
Predicted Functional Partners:
TVG0232273
Hypothetical protein.
  
     0.714
TVG0226058
Cyclomaltodextrinase [amylase].
 
  
 0.667
TVG0571194
Hypothetical protein.
  
 
   0.560
TVG0247983
Hypothetical protein.
  
     0.544
TVG1019152
TVG1019152 protein.
 
    0.502
TVG1314728
Hypothetical protein.
  
     0.492
TVG1328580
Hypothetical protein.
 
     0.489
TVG0154235
Hypothetical protein.
  
     0.472
TVG0929892
NADH-ubiquinone oxidoreductase.
 
    0.447
TVG1068265
TVG1068265 protein.
  
     0.435
Your Current Organism:
Thermoplasma volcanium
NCBI taxonomy Id: 273116
Other names: T. volcanium GSS1, Thermoplasma volcanium GSS1, Thermoplasma volcanium str. GSS1, Thermoplasma volcanium strain GSS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.