STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TVG1202787Hypothetical protein. (352 aa)    
Predicted Functional Partners:
TVG1202803
TVG1202803 protein.
 
     0.728
TVG1201040
TVG1201040 protein.
 
     0.718
TVG0719175
TVG0719175 protein.
 
     0.690
TVG1479283
Hypothetical protein.
  
     0.631
TVG0118145
Hypothetical protein.
 
     0.573
TVG0855624
Hypothetical protein.
  
     0.567
TVG0876539
Hypothetical protein.
  
     0.558
TVG1525115
Hypothetical protein.
  
     0.556
TVG1196198
ABC transport system protein SP1P2A.
 
     0.548
TVG1328580
Hypothetical protein.
 
   
 0.537
Your Current Organism:
Thermoplasma volcanium
NCBI taxonomy Id: 273116
Other names: T. volcanium GSS1, Thermoplasma volcanium GSS1, Thermoplasma volcanium str. GSS1, Thermoplasma volcanium strain GSS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.