Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| TVG0805746 | TVG1019998 | gene:9381594 | gene:9381788 | Hypohtetical protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Hypothetical protein. | 0.798 |
| TVG0805746 | TVG1210005 | gene:9381594 | gene:9381981 | Hypohtetical protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Hypothetical protein. | 0.798 |
| TVG1019998 | TVG0805746 | gene:9381788 | gene:9381594 | Hypothetical protein. | Hypohtetical protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.798 |
| TVG1019998 | TVG1210005 | gene:9381788 | gene:9381981 | Hypothetical protein. | Hypothetical protein. | 0.612 |
| TVG1019998 | TVG1210382 | gene:9381788 | gene:9381982 | Hypothetical protein. | TVG1210382 protein. | 0.518 |
| TVG1206711 | TVG1207583 | gene:9381978 | gene:9381979 | Aldo / keto reductase. | TVG1207583 protein. | 0.781 |
| TVG1206711 | TVG1208678 | gene:9381978 | gene:9381980 | Aldo / keto reductase. | TVG1208678 protein. | 0.583 |
| TVG1206711 | TVG1210005 | gene:9381978 | gene:9381981 | Aldo / keto reductase. | Hypothetical protein. | 0.444 |
| TVG1206711 | TVG1210382 | gene:9381978 | gene:9381982 | Aldo / keto reductase. | TVG1210382 protein. | 0.414 |
| TVG1207583 | TVG1206711 | gene:9381979 | gene:9381978 | TVG1207583 protein. | Aldo / keto reductase. | 0.781 |
| TVG1207583 | TVG1208678 | gene:9381979 | gene:9381980 | TVG1207583 protein. | TVG1208678 protein. | 0.590 |
| TVG1207583 | TVG1210005 | gene:9381979 | gene:9381981 | TVG1207583 protein. | Hypothetical protein. | 0.416 |
| TVG1207583 | TVG1210382 | gene:9381979 | gene:9381982 | TVG1207583 protein. | TVG1210382 protein. | 0.416 |
| TVG1208678 | TVG1206711 | gene:9381980 | gene:9381978 | TVG1208678 protein. | Aldo / keto reductase. | 0.583 |
| TVG1208678 | TVG1207583 | gene:9381980 | gene:9381979 | TVG1208678 protein. | TVG1207583 protein. | 0.590 |
| TVG1208678 | TVG1210005 | gene:9381980 | gene:9381981 | TVG1208678 protein. | Hypothetical protein. | 0.532 |
| TVG1208678 | TVG1210382 | gene:9381980 | gene:9381982 | TVG1208678 protein. | TVG1210382 protein. | 0.546 |
| TVG1208678 | TVG1211894 | gene:9381980 | gene:9381983 | TVG1208678 protein. | Sulfide dehydrogenase alpha subunit / glutamate synthase small chain. | 0.426 |
| TVG1210005 | TVG0805746 | gene:9381981 | gene:9381594 | Hypothetical protein. | Hypohtetical protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.798 |
| TVG1210005 | TVG1019998 | gene:9381981 | gene:9381788 | Hypothetical protein. | Hypothetical protein. | 0.612 |
page 1 of 2