STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mraZConserved hypothetical; Belongs to the MraZ family. (145 aa)    
Predicted Functional Partners:
rsmH
Conserved hypothetical; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
  
 0.994
rsmI
Conserved hypothetical; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
      
 0.756
UU387
Unique hypothetical.
       0.723
hrcA
Heat-inducible transcription repressor; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.
      
 0.650
UU384
Conserved hypothetical membrane lipoprotein.
  
    0.596
whiA
Conserved hypothetical; Involved in cell division and chromosome segregation.
     
 0.553
pstA
Phosphate transport system permease.
     
 0.538
pheT
phenylalanine-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
   0.536
dnaK
Heat shock protein 70 (hsp70); Acts as a chaperone; Belongs to the heat shock protein 70 family.
      
 0.534
UU388
Unique hypothetical.
       0.497
Your Current Organism:
Ureaplasma parvum
NCBI taxonomy Id: 273119
Other names: U. parvum serovar 3 str. ATCC 700970, Ureaplasma parvum serovar 3 str. ATCC 700970, Ureaplasma parvum serovar 3 strain ATCC 700970, Ureaplasma urealyticum ATCC 700970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.