STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WS0298Conserved hypothetical protein. (199 aa)    
Predicted Functional Partners:
WS0140
Conserved hypothetical protein.
     
  0.900
ACPP
ACYL CARRIER PROTEIN (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.690
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.675
truA
TRNA PSEUDOURIDINE SYNTHASE; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.661
STRA
SULFUR TRANSFERASE PRECURSOR.
  
 
 0.645
rsmH
Conserved hypothetical protein CJ0693C; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
   0.630
WS0299
PROBABLE DEOXYGUANOSINE TRIPHOSPHATE TRIPHOSPHOHYDROLASE PROTEIN EC3.1.5.1; Belongs to the dGTPase family. Type 2 subfamily.
       0.615
WS0304
Conserved hypothetical protein.
       0.565
argD
SUCCINYLORNITHINE TRANSAMINASE; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
    0.552
WS0303
Hypothetical protein.
     
 0.551
Your Current Organism:
Wolinella succinogenes
NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.