Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FDXA | NIFR1 | WS0032 | WS0526 | Hypothetical protein. | Hypothetical protein. | 0.471 |
FDXA | WS0564 | WS0032 | WS0564 | Hypothetical protein. | HYPOTHETICAL PROTEIN, WS0564; Belongs to the UPF0246 family. | 0.445 |
FDXA | WS1285 | WS0032 | WS1285 | Hypothetical protein. | Conserved hypothetical protein. | 0.534 |
FDXA | WS1660 | WS0032 | WS1660 | Hypothetical protein. | AAA FAMILY ATPASE. | 0.657 |
FDXA | WS2085 | WS0032 | WS2085 | Hypothetical protein. | Hypothetical protein. | 0.429 |
FDXA | hemH | WS0032 | WS0307 | Hypothetical protein. | Hypothetical protein. | 0.538 |
NIFR1 | FDXA | WS0526 | WS0032 | Hypothetical protein. | Hypothetical protein. | 0.471 |
NIFR1 | WS0305 | WS0526 | WS0305 | Hypothetical protein. | PUTATIVE TWO-COMPONENT SENSOR. | 0.446 |
NIFR1 | WS1285 | WS0526 | WS1285 | Hypothetical protein. | Conserved hypothetical protein. | 0.487 |
NIFR1 | WS1660 | WS0526 | WS1660 | Hypothetical protein. | AAA FAMILY ATPASE. | 0.594 |
NIFR1 | WS1901 | WS0526 | WS1901 | Hypothetical protein. | Conserved hypothetical protein. | 0.530 |
NIFR1 | hemH | WS0526 | WS0307 | Hypothetical protein. | Hypothetical protein. | 0.518 |
WS0305 | NIFR1 | WS0305 | WS0526 | PUTATIVE TWO-COMPONENT SENSOR. | Hypothetical protein. | 0.446 |
WS0305 | WS0306 | WS0305 | WS0306 | PUTATIVE TWO-COMPONENT SENSOR. | TWO-COMPONENT REGULATOR. | 0.957 |
WS0305 | hemH | WS0305 | WS0307 | PUTATIVE TWO-COMPONENT SENSOR. | Hypothetical protein. | 0.573 |
WS0306 | WS0305 | WS0306 | WS0305 | TWO-COMPONENT REGULATOR. | PUTATIVE TWO-COMPONENT SENSOR. | 0.957 |
WS0306 | hemH | WS0306 | WS0307 | TWO-COMPONENT REGULATOR. | Hypothetical protein. | 0.513 |
WS0564 | FDXA | WS0564 | WS0032 | HYPOTHETICAL PROTEIN, WS0564; Belongs to the UPF0246 family. | Hypothetical protein. | 0.445 |
WS0564 | WS1285 | WS0564 | WS1285 | HYPOTHETICAL PROTEIN, WS0564; Belongs to the UPF0246 family. | Conserved hypothetical protein. | 0.554 |
WS0564 | WS1660 | WS0564 | WS1660 | HYPOTHETICAL PROTEIN, WS0564; Belongs to the UPF0246 family. | AAA FAMILY ATPASE. | 0.464 |
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