STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBIA4-HYDROXYBENZOATE OCTAPRENYLTRANSFERASE; Belongs to the UbiA prenyltransferase family. (287 aa)    
Predicted Functional Partners:
WS1540
3-POLYPRENYL-4-HYDROXYBENZOATE DECARBOXYLASE; Belongs to the UbiD family.
 
  
 0.984
WS0611
OCTAPRENYL-HYDROXYBENZOATE CARBOXYLYASE; 3-OCTAPRENYL-4-HYDROXYBENZOATE CARBOXY-LYASE.
 
  
 0.980
WS1582
POLYPRENYL SYNTHETASE); Belongs to the FPP/GGPP synthase family.
  
 
 0.877
mqnC
Conserved hypothetical protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).
 
   
 0.853
WS0356
Hypothetical protein.
       0.816
WS0358
Hypothetical protein.
       0.816
ATPD
ATP SYNTHASE F1 SECTOR BETA SUBUNIT; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
 0.815
mqnD
Conserved hypothetical protein; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.
 
   
 0.813
mqnE
Conserved hypothetical protein-ThiH?; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.
 
   
 0.804
GLCD
GLYCOLATE OXIDASE SUBUNIT GLCD.
    
 0.690
Your Current Organism:
Wolinella succinogenes
NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740
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