STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
murJINTEGRAL MEMBRANE PROTEIN (MVIN HOMOLOG); Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (493 aa)    
Predicted Functional Partners:
CYSS
CYSTEINYL-TRNA SYNTHETASE FRAGMENT; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.816
RUVA
PUTATIVE HOLLIDAY JUNCTION DNA HELICASE; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
       0.642
WS0441
Conserved hypothetical protein.
       0.628
WS1801
FLAGELLAR BASAL-BODY ROD PROTEIN FLGG.
    
 
 0.564
WS1669
CELL DIVISION / PEPTIDOGLYCAN BIOSYNTHESIS PROTEIN; Belongs to the SEDS family.
 
  
 0.556
WS0447
Hypothetical protein.
     
 0.550
rsmI
PUTATIVE METHYLASE; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.540
MRDB
RODA PROTEIN HOMOLOG; Belongs to the SEDS family.
 
  
 0.529
WS0446
Conserved hypothetical protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.521
MURG
N-ACETYLGLUCOSAMINE TRANSFERASE; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
 
  
 0.513
Your Current Organism:
Wolinella succinogenes
NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740
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