STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dapBDIHYDRODIPICOLINATE REDUCTASE; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. (256 aa)    
Predicted Functional Partners:
DAPA
DIHYDRODIPICOLINATE SYNTHASE; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
 0.997
cysE
PROBABLE 2,3,4, 5-TETRAHYDROPYRIDINE-2-CARBOXYLATEN-SUCCINYLTRANSFERASE PROTEIN; Belongs to the transferase hexapeptide repeat family.
 
 
 0.970
DAPD
PUTATIVE SUCCINYL-TRANSFERASE; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
  
 
 0.953
WS2166
Hypothetical protein.
     
  0.900
aspB
PROBABLE AMINOTRANSFERASE PROTEIN.
 
      0.899
lysA
DIAMINOPIMELATE DECARBOXYLASE DAP DECARBOXYLASE; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
 
  
 0.824
TRXB
THIOREDOXIN REDUCTASE.
  
    0.819
WS1819
RNA NUCLEOTIDYLTRANSFERASE; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
    0.810
CARA
CARBAMOYL-PHOSPHATE SYNTHASE SMALL CHAIN; Belongs to the CarA family.
 
  
 0.790
TRXA
THIOREDOXIN; Belongs to the thioredoxin family.
       0.775
Your Current Organism:
Wolinella succinogenes
NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.