Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HLYA | PYRB | WS0585 | WS0580 | PUTATIVE HEMOLYSIN. | ASPARTATE CARBAMOYLTRANSFERASE; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.542 |
HLYA | RIBF | WS0585 | WS0586 | PUTATIVE HEMOLYSIN. | PUTATIVE RIBOFLAVIN KINASE /FMN ADENYLYLTRANSFERASE; Belongs to the ribF family. | 0.816 |
HLYA | RPOB | WS0585 | WS0467 | PUTATIVE HEMOLYSIN. | DNA-DIRECTED RNA POLYMERASE, BETA SUBUNIT RPOB; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.781 |
HLYA | WS0583 | WS0585 | WS0583 | PUTATIVE HEMOLYSIN. | UDP-GLUCOSE DEHYDROGENASE. | 0.739 |
HLYA | WS0584 | WS0585 | WS0584 | PUTATIVE HEMOLYSIN. | HYPOTHETICAL PROTEIN, WS0584. | 0.814 |
HLYA | WS0589 | WS0585 | WS0589 | PUTATIVE HEMOLYSIN. | Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.510 |
HLYA | cmoA | WS0585 | WS0587 | PUTATIVE HEMOLYSIN. | Conserved hypothetical protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | 0.809 |
HLYA | dapE | WS0585 | WS0588 | PUTATIVE HEMOLYSIN. | DESUCCINYLASE; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.778 |
HLYA | dxs | WS0585 | WS1996 | PUTATIVE HEMOLYSIN. | 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.519 |
HLYA | nadK | WS0585 | WS1623 | PUTATIVE HEMOLYSIN. | Conserved hypothetical protein-Predicted kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.550 |
PYRB | HLYA | WS0580 | WS0585 | ASPARTATE CARBAMOYLTRANSFERASE; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | PUTATIVE HEMOLYSIN. | 0.542 |
PYRB | RIBF | WS0580 | WS0586 | ASPARTATE CARBAMOYLTRANSFERASE; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | PUTATIVE RIBOFLAVIN KINASE /FMN ADENYLYLTRANSFERASE; Belongs to the ribF family. | 0.597 |
PYRB | WS0583 | WS0580 | WS0583 | ASPARTATE CARBAMOYLTRANSFERASE; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | UDP-GLUCOSE DEHYDROGENASE. | 0.547 |
PYRB | WS0584 | WS0580 | WS0584 | ASPARTATE CARBAMOYLTRANSFERASE; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | HYPOTHETICAL PROTEIN, WS0584. | 0.509 |
PYRB | cmoA | WS0580 | WS0587 | ASPARTATE CARBAMOYLTRANSFERASE; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | Conserved hypothetical protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | 0.483 |
PYRB | dapE | WS0580 | WS0588 | ASPARTATE CARBAMOYLTRANSFERASE; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | DESUCCINYLASE; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.482 |
RIBF | HLYA | WS0586 | WS0585 | PUTATIVE RIBOFLAVIN KINASE /FMN ADENYLYLTRANSFERASE; Belongs to the ribF family. | PUTATIVE HEMOLYSIN. | 0.816 |
RIBF | PYRB | WS0586 | WS0580 | PUTATIVE RIBOFLAVIN KINASE /FMN ADENYLYLTRANSFERASE; Belongs to the ribF family. | ASPARTATE CARBAMOYLTRANSFERASE; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.597 |
RIBF | RPOB | WS0586 | WS0467 | PUTATIVE RIBOFLAVIN KINASE /FMN ADENYLYLTRANSFERASE; Belongs to the ribF family. | DNA-DIRECTED RNA POLYMERASE, BETA SUBUNIT RPOB; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.457 |
RIBF | WS0583 | WS0586 | WS0583 | PUTATIVE RIBOFLAVIN KINASE /FMN ADENYLYLTRANSFERASE; Belongs to the ribF family. | UDP-GLUCOSE DEHYDROGENASE. | 0.768 |
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