Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ATPA | GLNA | WS0514 | WS2124 | ATP SYNTHASE F1 ALPHA SUBUNIT; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | GLUTAMINE SYNTHETASE. | 0.554 |
| ATPA | RECA | WS0514 | WS1493 | ATP SYNTHASE F1 ALPHA SUBUNIT; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | RECA PROTEIN; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.603 |
| ATPA | glmM | WS0514 | WS0818 | ATP SYNTHASE F1 ALPHA SUBUNIT; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | PUTATIVE PHOSPHO-SUGAR MUTASE; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.718 |
| ATPA | glmU | WS0514 | WS2089 | ATP SYNTHASE F1 ALPHA SUBUNIT; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE GLMU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family. | 0.482 |
| FOLP | glmM | WS1732 | WS0818 | DIHYDROPTEROATE SYNTHASE. | PUTATIVE PHOSPHO-SUGAR MUTASE; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.566 |
| GLMS | GLNA | WS0022 | WS2124 | GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE ISOMERIZING; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | GLUTAMINE SYNTHETASE. | 0.922 |
| GLMS | glmM | WS0022 | WS0818 | GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE ISOMERIZING; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | PUTATIVE PHOSPHO-SUGAR MUTASE; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.958 |
| GLMS | glmU | WS0022 | WS2089 | GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE ISOMERIZING; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE GLMU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family. | 0.921 |
| GLNA | ATPA | WS2124 | WS0514 | GLUTAMINE SYNTHETASE. | ATP SYNTHASE F1 ALPHA SUBUNIT; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.554 |
| GLNA | GLMS | WS2124 | WS0022 | GLUTAMINE SYNTHETASE. | GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE ISOMERIZING; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.922 |
| GLNA | glmM | WS2124 | WS0818 | GLUTAMINE SYNTHETASE. | PUTATIVE PHOSPHO-SUGAR MUTASE; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.736 |
| LSPA | PRFA | WS0819 | WS0816 | LIPOPROTEIN SIGNAL PEPTIDASE A; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | PEPTIDE CHAIN RELEASE FACTOR 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.554 |
| LSPA | glmM | WS0819 | WS0818 | LIPOPROTEIN SIGNAL PEPTIDASE A; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | PUTATIVE PHOSPHO-SUGAR MUTASE; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.843 |
| LSPA | rpsT | WS0819 | WS0817 | LIPOPROTEIN SIGNAL PEPTIDASE A; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 30S RIBOSOMAL PROTEIN S20; Binds directly to 16S ribosomal RNA. | 0.635 |
| MURC | glmM | WS1484 | WS0818 | UDP-N-ACETYLMURAMATE--ALANINE LIGASE; Cell wall formation; Belongs to the MurCDEF family. | PUTATIVE PHOSPHO-SUGAR MUTASE; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.623 |
| MURC | glmU | WS1484 | WS2089 | UDP-N-ACETYLMURAMATE--ALANINE LIGASE; Cell wall formation; Belongs to the MurCDEF family. | UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE GLMU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family. | 0.815 |
| PRFA | LSPA | WS0816 | WS0819 | PEPTIDE CHAIN RELEASE FACTOR 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | LIPOPROTEIN SIGNAL PEPTIDASE A; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.554 |
| PRFA | glmM | WS0816 | WS0818 | PEPTIDE CHAIN RELEASE FACTOR 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | PUTATIVE PHOSPHO-SUGAR MUTASE; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.570 |
| PRFA | rpsT | WS0816 | WS0817 | PEPTIDE CHAIN RELEASE FACTOR 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 30S RIBOSOMAL PROTEIN S20; Binds directly to 16S ribosomal RNA. | 0.938 |
| RECA | ATPA | WS1493 | WS0514 | RECA PROTEIN; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | ATP SYNTHASE F1 ALPHA SUBUNIT; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.603 |
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