Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GLNA | NIFH | WS2124 | WS1394 | GLUTAMINE SYNTHETASE. | DINITROGENASE REDUCTASE SUBUNIT; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. | 0.976 |
| GLNA | NRFA | WS2124 | WS0969 | GLUTAMINE SYNTHETASE. | CYTOCHROME C NITRITE REDUCTASE; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process. Has very low activity toward hydroxylamine, and even lower activity toward sulfite. Sulfite reductase activity is maximal at neutral pH. | 0.909 |
| GLNA | NRFH | WS2124 | WS0970 | GLUTAMINE SYNTHETASE. | SMALL SUBUNIT OF CYTOCHROME C NITRITE REDUCTASE; Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit. | 0.900 |
| GLNA | gdhA | WS2124 | WS1924 | GLUTAMINE SYNTHETASE. | NADP-SPECIFIC GLUTAMATE DEHYDROGENASE; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.936 |
| GLNA | hcp | WS2124 | WS1183 | GLUTAMINE SYNTHETASE. | PRISMANE PROTEIN HOMOLOG; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.900 |
| NAPA | NAPB | WS1178 | WS1174 | PERIPLASMIC NITRATE REDUCTASE; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | PERIPLASMIC NITRATE REDUCTASE SMALL SUBUNIT CYTOCHROME C-TYPEPROTEIN; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB. Transfers electrons to NapA subunit, thus allowing electron flow between membrane and periplasm. Essential for periplasmic nitrate reduction with nitrate as the terminal electron acceptor. | 0.999 |
| NAPA | NRFA | WS1178 | WS0969 | PERIPLASMIC NITRATE REDUCTASE; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | CYTOCHROME C NITRITE REDUCTASE; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process. Has very low activity toward hydroxylamine, and even lower activity toward sulfite. Sulfite reductase activity is maximal at neutral pH. | 0.967 |
| NAPA | NRFH | WS1178 | WS0970 | PERIPLASMIC NITRATE REDUCTASE; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | SMALL SUBUNIT OF CYTOCHROME C NITRITE REDUCTASE; Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit. | 0.982 |
| NAPA | WS0242 | WS1178 | WS0242 | PERIPLASMIC NITRATE REDUCTASE; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | Conserved hypothetical protein. | 0.900 |
| NAPB | NAPA | WS1174 | WS1178 | PERIPLASMIC NITRATE REDUCTASE SMALL SUBUNIT CYTOCHROME C-TYPEPROTEIN; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB. Transfers electrons to NapA subunit, thus allowing electron flow between membrane and periplasm. Essential for periplasmic nitrate reduction with nitrate as the terminal electron acceptor. | PERIPLASMIC NITRATE REDUCTASE; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.999 |
| NAPB | NRFA | WS1174 | WS0969 | PERIPLASMIC NITRATE REDUCTASE SMALL SUBUNIT CYTOCHROME C-TYPEPROTEIN; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB. Transfers electrons to NapA subunit, thus allowing electron flow between membrane and periplasm. Essential for periplasmic nitrate reduction with nitrate as the terminal electron acceptor. | CYTOCHROME C NITRITE REDUCTASE; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process. Has very low activity toward hydroxylamine, and even lower activity toward sulfite. Sulfite reductase activity is maximal at neutral pH. | 0.941 |
| NAPB | NRFH | WS1174 | WS0970 | PERIPLASMIC NITRATE REDUCTASE SMALL SUBUNIT CYTOCHROME C-TYPEPROTEIN; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB. Transfers electrons to NapA subunit, thus allowing electron flow between membrane and periplasm. Essential for periplasmic nitrate reduction with nitrate as the terminal electron acceptor. | SMALL SUBUNIT OF CYTOCHROME C NITRITE REDUCTASE; Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit. | 0.986 |
| NAPB | WS0242 | WS1174 | WS0242 | PERIPLASMIC NITRATE REDUCTASE SMALL SUBUNIT CYTOCHROME C-TYPEPROTEIN; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB. Transfers electrons to NapA subunit, thus allowing electron flow between membrane and periplasm. Essential for periplasmic nitrate reduction with nitrate as the terminal electron acceptor. | Conserved hypothetical protein. | 0.900 |
| NIFH | GLNA | WS1394 | WS2124 | DINITROGENASE REDUCTASE SUBUNIT; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. | GLUTAMINE SYNTHETASE. | 0.976 |
| NIFH | NRFA | WS1394 | WS0969 | DINITROGENASE REDUCTASE SUBUNIT; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. | CYTOCHROME C NITRITE REDUCTASE; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process. Has very low activity toward hydroxylamine, and even lower activity toward sulfite. Sulfite reductase activity is maximal at neutral pH. | 0.913 |
| NIFH | NRFH | WS1394 | WS0970 | DINITROGENASE REDUCTASE SUBUNIT; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. | SMALL SUBUNIT OF CYTOCHROME C NITRITE REDUCTASE; Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit. | 0.909 |
| NIFH | gdhA | WS1394 | WS1924 | DINITROGENASE REDUCTASE SUBUNIT; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. | NADP-SPECIFIC GLUTAMATE DEHYDROGENASE; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.909 |
| NIFH | hcp | WS1394 | WS1183 | DINITROGENASE REDUCTASE SUBUNIT; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. | PRISMANE PROTEIN HOMOLOG; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.919 |
| NRFA | GLNA | WS0969 | WS2124 | CYTOCHROME C NITRITE REDUCTASE; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process. Has very low activity toward hydroxylamine, and even lower activity toward sulfite. Sulfite reductase activity is maximal at neutral pH. | GLUTAMINE SYNTHETASE. | 0.909 |
| NRFA | NAPA | WS0969 | WS1178 | CYTOCHROME C NITRITE REDUCTASE; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process. Has very low activity toward hydroxylamine, and even lower activity toward sulfite. Sulfite reductase activity is maximal at neutral pH. | PERIPLASMIC NITRATE REDUCTASE; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.967 |
page 1 of 3