STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WS1819RNA NUCLEOTIDYLTRANSFERASE; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (379 aa)    
Predicted Functional Partners:
PNP
NUCLEOTIDYLTRANSFERASE; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.838
dapB
DIHYDRODIPICOLINATE REDUCTASE; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
  
    0.810
WS1818
HISTIDINE KINASE SENSOR PROTEIN.
       0.774
WS1817
RESPONSE REGULATOR OMPR.
       0.773
FOLK
PYROPHOSPHOKINASE-7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase.
  
    0.751
WS1820
Hypothetical protein.
       0.723
HEMB
DELTA-AMINOLEVULINIC ACID DEHYDRATASE PORPHOBILINOGENSYNTHASE ALADH; Belongs to the ALAD family.
       0.703
PURU
FORMYLTETRAHYDROFOLATE DEFORMYLASE; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
      0.695
WS1822
Hypothetical protein.
       0.666
WS1801
FLAGELLAR BASAL-BODY ROD PROTEIN FLGG.
   
   0.580
Your Current Organism:
Wolinella succinogenes
NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.