STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNABC TRANSPORT ATP-BINDING PROTEIN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (303 aa)    
Predicted Functional Partners:
CAC0985
ABC TRANSPORTER PERMEASE COMPONENT.
 0.999
WS1945
PUTATIVE PERIPLASMIC PROTEIN - ABC TRANSPORT SYSTEM; Belongs to the nlpA lipoprotein family.
 0.999
WS0986
OLIGOPEPTIDE ABC TRANSPORTER PERMEASE.
 
    0.876
WS1980
ABC TRANSPORTER, ATP-BINDING PROTEIN.
 
     
0.874
WS0280
PROBABLE PERMEASE OF ABC TRANSPORTER.
 
    
 0.834
nuoB
HYDROGENASE-Ni,Fe-hydrogenase III small subunit.
    
   0.691
WS1441
METHYLENETETRAHYDROFOLATE REDUCTASE; Belongs to the methylenetetrahydrofolate reductase family.
   
  
 0.662
metX
METHIONINE ADENOSYLTRANSFERASE 1 (ADOMET SYNTHETASE) (S-ADENOSYLMETHIONINE SYNTHETASE); Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
  
 0.623
YBTQ
YBTQ PROTEIN.
 
    
0.581
WS0979
OLIGOPEPTIDE ABC TRANSPORTER PERMEASE.
 
    0.572
Your Current Organism:
Wolinella succinogenes
NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740
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