PDP protein (Wolinella succinogenes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PDP

PDP PROTEIN. (199 aa)

Predicted Functional Partners:

FLIH

0.959

FLIL

0.954

HAP1

0.951

fliY

0.942

WS1638

0.930

WS1760

0.919

FLIF

0.898

FLIG

0.893

flgH

0.887

WS1761

0.883

Your Current Organism:

Wolinella succinogenes

NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FLIF	FLIG	WS1999	WS1998	FLAGELLAR BASAL-BODY M-RING PROTEIN FLIF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.	FLAGELLAR MOTOR SWITCH PROTEIN FLIG.	0.999
FLIF	FLIH	WS1999	WS1997	FLAGELLAR BASAL-BODY M-RING PROTEIN FLIF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.	PUTATIVE FLAGELLAR EXPORT APPARATUS.	0.994
FLIF	FLIL	WS1999	WS1970	FLAGELLAR BASAL-BODY M-RING PROTEIN FLIF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.	HYPOTHETICAL PROTEIN-Flagellar basal body associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.	0.964
FLIF	HAP1	WS1999	WS0259	FLAGELLAR BASAL-BODY M-RING PROTEIN FLIF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.	FLAGELLAR HOOK-ASSOCIATED PROTEIN 1.	0.971
FLIF	PDP	WS1999	WS2054	FLAGELLAR BASAL-BODY M-RING PROTEIN FLIF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.	PDP PROTEIN.	0.898
FLIF	WS1638	WS1999	WS1638	FLAGELLAR BASAL-BODY M-RING PROTEIN FLIF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.	FLAGELLAR MOTOR SWITCH PROTEIN FLIM.	0.967
FLIF	WS1760	WS1999	WS1760	FLAGELLAR BASAL-BODY M-RING PROTEIN FLIF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.	FLAGELLAR BIOSYNTHESIS PROTEIN; Required for flagellar hook formation. May act as a scaffolding protein.	0.977
FLIF	WS1761	WS1999	WS1761	FLAGELLAR BASAL-BODY M-RING PROTEIN FLIF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.	Conserved hypothetical protein.	0.911
FLIF	flgH	WS1999	WS2105	FLAGELLAR BASAL-BODY M-RING PROTEIN FLIF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.	FLAGELLAR L-RING PROTEIN FLGH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.	0.996
FLIF	fliY	WS1999	WS1637	FLAGELLAR BASAL-BODY M-RING PROTEIN FLIF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.	FLAGELLAR MOTOR SWITCH PROTEIN.	0.984
FLIG	FLIF	WS1998	WS1999	FLAGELLAR MOTOR SWITCH PROTEIN FLIG.	FLAGELLAR BASAL-BODY M-RING PROTEIN FLIF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.	0.999
FLIG	FLIH	WS1998	WS1997	FLAGELLAR MOTOR SWITCH PROTEIN FLIG.	PUTATIVE FLAGELLAR EXPORT APPARATUS.	0.996
FLIG	FLIL	WS1998	WS1970	FLAGELLAR MOTOR SWITCH PROTEIN FLIG.	HYPOTHETICAL PROTEIN-Flagellar basal body associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.	0.914
FLIG	HAP1	WS1998	WS0259	FLAGELLAR MOTOR SWITCH PROTEIN FLIG.	FLAGELLAR HOOK-ASSOCIATED PROTEIN 1.	0.979
FLIG	PDP	WS1998	WS2054	FLAGELLAR MOTOR SWITCH PROTEIN FLIG.	PDP PROTEIN.	0.893
FLIG	WS1638	WS1998	WS1638	FLAGELLAR MOTOR SWITCH PROTEIN FLIG.	FLAGELLAR MOTOR SWITCH PROTEIN FLIM.	0.999
FLIG	WS1760	WS1998	WS1760	FLAGELLAR MOTOR SWITCH PROTEIN FLIG.	FLAGELLAR BIOSYNTHESIS PROTEIN; Required for flagellar hook formation. May act as a scaffolding protein.	0.921
FLIG	WS1761	WS1998	WS1761	FLAGELLAR MOTOR SWITCH PROTEIN FLIG.	Conserved hypothetical protein.	0.910
FLIG	flgH	WS1998	WS2105	FLAGELLAR MOTOR SWITCH PROTEIN FLIG.	FLAGELLAR L-RING PROTEIN FLGH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.	0.962
FLIG	fliY	WS1998	WS1637	FLAGELLAR MOTOR SWITCH PROTEIN FLIG.	FLAGELLAR MOTOR SWITCH PROTEIN.	0.999