Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
THRC | WS2104 | WS2110 | WS2104 | THREONINE SYNTHASE. | Conserved hypothetical protein. | 0.412 |
THRC | WS2106 | WS2110 | WS2106 | THREONINE SYNTHASE. | PUTATIVE POLYSACCHARIDE BIOSYNTHESIS PROTEIN. | 0.559 |
THRC | WS2107 | WS2110 | WS2107 | THREONINE SYNTHASE. | Hypothetical protein. | 0.559 |
THRC | WS2108 | WS2110 | WS2108 | THREONINE SYNTHASE. | FLAGELLAR PROTEIN G FLAG. | 0.583 |
THRC | WS2109 | WS2110 | WS2109 | THREONINE SYNTHASE. | SIALIC ACID SYNTHASE. | 0.559 |
THRC | flgH | WS2110 | WS2105 | THREONINE SYNTHASE. | FLAGELLAR L-RING PROTEIN FLGH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.592 |
THRC | uvrA | WS2110 | WS2103 | THREONINE SYNTHASE. | Hypothetical protein. | 0.496 |
WS1076 | WS2061 | WS1076 | WS2061 | PUTATIVE AMINOTRANSFERASE DEGT FAMILY; Belongs to the DegT/DnrJ/EryC1 family. | FLAA1 PROTEIN. | 0.990 |
WS1076 | WS2106 | WS1076 | WS2106 | PUTATIVE AMINOTRANSFERASE DEGT FAMILY; Belongs to the DegT/DnrJ/EryC1 family. | PUTATIVE POLYSACCHARIDE BIOSYNTHESIS PROTEIN. | 0.503 |
WS1076 | WS2107 | WS1076 | WS2107 | PUTATIVE AMINOTRANSFERASE DEGT FAMILY; Belongs to the DegT/DnrJ/EryC1 family. | Hypothetical protein. | 0.511 |
WS1076 | WS2108 | WS1076 | WS2108 | PUTATIVE AMINOTRANSFERASE DEGT FAMILY; Belongs to the DegT/DnrJ/EryC1 family. | FLAGELLAR PROTEIN G FLAG. | 0.919 |
WS1076 | WS2109 | WS1076 | WS2109 | PUTATIVE AMINOTRANSFERASE DEGT FAMILY; Belongs to the DegT/DnrJ/EryC1 family. | SIALIC ACID SYNTHASE. | 0.526 |
WS2061 | WS1076 | WS2061 | WS1076 | FLAA1 PROTEIN. | PUTATIVE AMINOTRANSFERASE DEGT FAMILY; Belongs to the DegT/DnrJ/EryC1 family. | 0.990 |
WS2061 | WS2107 | WS2061 | WS2107 | FLAA1 PROTEIN. | Hypothetical protein. | 0.703 |
WS2061 | WS2109 | WS2061 | WS2109 | FLAA1 PROTEIN. | SIALIC ACID SYNTHASE. | 0.673 |
WS2061 | flgH | WS2061 | WS2105 | FLAA1 PROTEIN. | FLAGELLAR L-RING PROTEIN FLGH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.691 |
WS2102 | WS2104 | WS2102 | WS2104 | Hypothetical protein. | Conserved hypothetical protein. | 0.604 |
WS2102 | WS2106 | WS2102 | WS2106 | Hypothetical protein. | PUTATIVE POLYSACCHARIDE BIOSYNTHESIS PROTEIN. | 0.438 |
WS2102 | WS2107 | WS2102 | WS2107 | Hypothetical protein. | Hypothetical protein. | 0.438 |
WS2102 | WS2108 | WS2102 | WS2108 | Hypothetical protein. | FLAGELLAR PROTEIN G FLAG. | 0.438 |
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