STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_081950Rab-GAP TBC domain-containing protein. (918 aa)    
Predicted Functional Partners:
PEX2_081960
Protein prenyltransferase, alpha subunit.
 
      0.820
PEX2_032990
Small GTPase superfamily, Rab type.
    
 0.778
PEX2_033880
Small GTPase superfamily, Rab type.
    
 0.754
PEX2_069060
Uncharacterized protein.
    
 
 0.683
PEX2_079670
Small GTPase superfamily, Ras type.
    
 0.653
PEX2_077220
Small GTPase superfamily.
    
 0.653
PEX2_108670
Small GTPase superfamily, Ras type.
    
 0.653
PEX2_102480
Amphiphysin.
    
 
 0.632
PEX2_010540
Choline/Ethanolamine kinase.
   
 
  0.530
PEX2_082680
Rab-GAP TBC domain-containing protein.
    
 
0.510
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.