STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_009410Uncharacterized protein. (469 aa)    
Predicted Functional Partners:
PEX2_102780
Pseudouridine synthase II.
   
   0.733
PEX2_025010
Protein MAK16; Belongs to the MAK16 family.
   
  
 0.694
PEX2_074110
Fcf2 pre-rRNA processing.
   
  
 0.692
PEX2_086780
Eukaryotic rRNA processing.
   
    0.678
PEX2_099330
Surfeit locus 6.
   
   0.662
PEX2_099340
Uncharacterized protein.
   
   0.662
PEX2_086760
tRNA pseudouridine synthase II, TruB.
   
   0.645
PEX2_009420
Proteasome subunit alpha type.
 
  
   0.644
PEX2_044260
Uncharacterized protein.
   
   0.638
PEX2_101080
CCAAT-binding factor.
   
   0.634
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.