STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_070990Cleavage/polyadenylation specificity factor subunit 5. (298 aa)    
Predicted Functional Partners:
PEX2_040170
Nucleotide-binding, alpha-beta plait.
    
 0.998
PEX2_029530
Pre-mRNA polyadenylation factor Fip1.
   
 0.981
PEX2_093900
RNA polymerase II, large subunit, CTD.
    
 0.922
PEX2_078390
Cleavage and polyadenylation specificity factor subunit 2.
   
 
 0.900
PEX2_110680
Nucleotide-binding, alpha-beta plait.
   
 0.877
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
   
 0.865
PEX2_035860
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
 
 
    0.858
PEX2_009730
RNA-processing protein, HAT helix.
   
 
 0.854
PEX2_043070
Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term.
   
 
 0.845
PEX2_039150
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.842
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.