STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_080390Uncharacterized protein. (402 aa)    
Predicted Functional Partners:
PEX2_040170
Nucleotide-binding, alpha-beta plait.
   
 0.912
PEX2_069630
DNA-binding HORMA.
   
 0.844
PEX2_063430
Armadillo-like helical.
   
 0.842
PEX2_003980
DUF3591 domain-containing protein.
   
 0.837
PEX2_084230
Mad3/BUB1 homology region 1.
   
 0.836
PEX2_019640
Histone-fold.
   
 0.835
PEX2_098130
TATA box binding protein associated factor (TAF).
    
 0.834
PEX2_005710
Histone-fold.
    
 0.834
PEX2_038130
Uncharacterized protein.
   
 0.834
PEX2_087860
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.834
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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