STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_051640Zinc finger, C2H2. (189 aa)    
Predicted Functional Partners:
PEX2_087450
Helicase, C-terminal.
    
 0.873
PEX2_029120
RNA helicase.
    
 0.839
PEX2_040070
G-patch domain-containing protein.
    
 
 0.798
PEX2_037720
U3 small nucleolar RNA-associated protein 22.
    
 
 0.798
PEX2_078410
RNA-processing protein, HAT helix.
    
 
 0.794
PEX2_051700
Bystin.
    
   0.793
PEX2_108380
Nop14-like protein.
    
   0.793
PEX2_001260
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
   0.793
PEX2_046240
Ribosomal protein S4/S9.
    
   0.793
PEX2_096830
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
    
   0.793
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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