STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_022630Rhodopsin, archaeal/bacterial/fungal. (302 aa)    
Predicted Functional Partners:
PEX2_022620
Isoleucine-tRNA ligase, type 1; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
      0.673
PEX2_008430
Hly-III-like protein.
    
 
 0.546
PEX2_036860
Hly-III-like protein.
    
 
 0.545
PEX2_044060
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
      
 0.520
PEX2_106750
Glucose receptor Git3, N-terminal.
      
 0.520
PEX2_073370
Fungal pheromone STE3 GPCR.
      
 0.520
PEX2_024770
Uncharacterized protein.
      
 0.520
PEX2_080980
Uncharacterized protein.
      
 0.519
PEX2_008960
Uncharacterized protein.
   
   0.412
PEX2_009080
TspO/MBR-related protein.
   
  
 0.409
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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