STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_060920Nucleolar 27S pre-rRNA processing, Urb2/Npa2, C-terminal. (1481 aa)    
Predicted Functional Partners:
PEX2_107800
Nucleolar pre-ribosomal-associated protein 1, N-terminal.
   
 
 0.912
PEX2_011370
Helicase, C-terminal.
   
 
 0.878
PEX2_020620
Histone H4 acetyltransferase, NuA4 complex, Eaf6.
    
 0.817
PEX2_084720
Nucleic acid-binding, OB-fold.
   
  
 0.810
PEX2_053960
HEAT, type 2.
   
   0.799
PEX2_022200
Putative domain NUC173.
   
    0.796
PEX2_056980
Small-subunit processome, Utp13.
   
   0.789
PEX2_051530
Small-subunit processome, Utp21.
   
    0.781
PEX2_000330
Small-subunit processome, Utp12.
   
    0.778
PEX2_088760
WD_REPEATS_REGION domain-containing protein.
   
    0.778
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.