STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_056890Ribosomal protein L34. (109 aa)    
Predicted Functional Partners:
PEX2_019220
Ribosomal protein L13, bacterial-type.
   
 
 0.992
PEX2_033580
L51_S25_CI-B8 domain-containing protein.
   
 
 0.991
PEX2_026570
S15/NS1, RNA-binding; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.989
PEX2_042040
Ribosomal protein L46.
   
 
 0.989
PEX2_043830
Ribosomal protein L19.
   
 
 0.986
PEX2_071730
Uncharacterized protein.
   
 
 0.985
PEX2_075570
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.985
PEX2_059370
Translation elongation/initiation factor/Ribosomal, beta-barrel; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.984
PEX2_085350
Ribosomal protein L22, bacterial/chloroplast-type; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.984
PEX2_064270
Ribosomal protein L30, bacterial-type.
   
 
 0.983
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.