STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_057940Heat shock protein DnaJ, N-terminal. (233 aa)    
Predicted Functional Partners:
PEX2_100980
WD_REPEATS_REGION domain-containing protein.
    
   0.980
PEX2_083340
Uncharacterized protein.
    
 
 0.975
PEX2_101420
RNA-processing protein, HAT helix.
    
 
 0.968
PEX2_033550
Zinc finger, RING/FYVE/PHD-type.
    
   0.968
PEX2_086390
G10 protein.
    
   0.968
PEX2_104030
G-patch domain-containing protein.
    
 
 0.941
PEX2_087450
Helicase, C-terminal.
    
 
 0.933
PEX2_084510
Translation elongation/initiation factor/Ribosomal, beta-barrel.
  
 0.921
PEX2_106550
JAB_MPN domain-containing protein.
    
   0.901
PEX2_108270
Uncharacterized protein.
    
   0.880
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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