PEX2_023920 protein (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PEX2_023920

Uncharacterized protein. (348 aa)

Predicted Functional Partners:

PEX2_003370

0.993

PEX2_052180

0.851

MEF2

0.780

MEF1

0.780

PEX2_084510

0.780

PEX2_033530

0.780

PEX2_018220

0.708

PEX2_042800

0.580

EFM4

0.518

PEX2_070310

0.453

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFM4	PEX2_003370	A0A0A2JJG7	A0A0A2JQQ0	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	Translation elongation/initiation factor/Ribosomal, beta-barrel.	0.540
EFM4	PEX2_023920	A0A0A2JJG7	A0A0A2JEQ3	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	Uncharacterized protein.	0.518
EFM4	PEX2_042800	A0A0A2JJG7	A0A0A2KFF6	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	Vacuolar protein sorting-associated, VPS28.	0.600
EFM4	PEX2_070310	A0A0A2JJG7	A0A0A2KT78	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	Uncharacterized protein.	0.462
MEF1	PEX2_023920	A0A0A2J9Z0	A0A0A2JEQ3	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Uncharacterized protein.	0.780
MEF1	PEX2_052180	A0A0A2J9Z0	A0A0A2J2G2	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Kin17_mid domain-containing protein.	0.438
MEF2	PEX2_023920	A0A0A2IPU0	A0A0A2JEQ3	Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.	Uncharacterized protein.	0.780
MEF2	PEX2_052180	A0A0A2IPU0	A0A0A2J2G2	Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.	Kin17_mid domain-containing protein.	0.438
PEX2_003370	EFM4	A0A0A2JQQ0	A0A0A2JJG7	Translation elongation/initiation factor/Ribosomal, beta-barrel.	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.540
PEX2_003370	PEX2_023920	A0A0A2JQQ0	A0A0A2JEQ3	Translation elongation/initiation factor/Ribosomal, beta-barrel.	Uncharacterized protein.	0.993
PEX2_003370	PEX2_042800	A0A0A2JQQ0	A0A0A2KFF6	Translation elongation/initiation factor/Ribosomal, beta-barrel.	Vacuolar protein sorting-associated, VPS28.	0.408
PEX2_003370	PEX2_052180	A0A0A2JQQ0	A0A0A2J2G2	Translation elongation/initiation factor/Ribosomal, beta-barrel.	Kin17_mid domain-containing protein.	0.441
PEX2_018220	PEX2_023920	A0A0A2IUM6	A0A0A2JEQ3	Small GTPase superfamily, Rab type.	Uncharacterized protein.	0.708
PEX2_023920	EFM4	A0A0A2JEQ3	A0A0A2JJG7	Uncharacterized protein.	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.518
PEX2_023920	MEF1	A0A0A2JEQ3	A0A0A2J9Z0	Uncharacterized protein.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.780
PEX2_023920	MEF2	A0A0A2JEQ3	A0A0A2IPU0	Uncharacterized protein.	Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.	0.780
PEX2_023920	PEX2_003370	A0A0A2JEQ3	A0A0A2JQQ0	Uncharacterized protein.	Translation elongation/initiation factor/Ribosomal, beta-barrel.	0.993
PEX2_023920	PEX2_018220	A0A0A2JEQ3	A0A0A2IUM6	Uncharacterized protein.	Small GTPase superfamily, Rab type.	0.708
PEX2_023920	PEX2_033530	A0A0A2JEQ3	A0A0A2KWK0	Uncharacterized protein.	Translation elongation/initiation factor/Ribosomal, beta-barrel.	0.780
PEX2_023920	PEX2_042800	A0A0A2JEQ3	A0A0A2KFF6	Uncharacterized protein.	Vacuolar protein sorting-associated, VPS28.	0.580