PEX2_039760 protein (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PEX2_039760

Ubiquitin carboxyl-terminal hydrolase. (318 aa)

Predicted Functional Partners:

PEX2_068620

0.993

PEX2_106310

0.977

PEX2_047980

0.977

PEX2_010120

0.975

PEX2_093930

0.972

PEX2_024910

0.972

PEX2_026310

0.972

PEX2_009310

0.971

PEX2_050550

0.971

PEX2_057010

0.970

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_009310	PEX2_010120	A0A0A2I3G5	A0A0A2I973	ATPase, AAA-type, core; Belongs to the AAA ATPase family.	26S proteasome complex ubiquitin receptor, subunit Rpn13.	0.998
PEX2_009310	PEX2_024910	A0A0A2I3G5	A0A0A2JF16	ATPase, AAA-type, core; Belongs to the AAA ATPase family.	PCI/PINT associated module.	0.999
PEX2_009310	PEX2_026310	A0A0A2I3G5	A0A0A2KEW0	ATPase, AAA-type, core; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.997
PEX2_009310	PEX2_039760	A0A0A2I3G5	A0A0A2JFU0	ATPase, AAA-type, core; Belongs to the AAA ATPase family.	Ubiquitin carboxyl-terminal hydrolase.	0.971
PEX2_009310	PEX2_047980	A0A0A2I3G5	A0A0A2KM70	ATPase, AAA-type, core; Belongs to the AAA ATPase family.	26S proteasome non-ATPase regulatory subunit Rpn12.	0.999
PEX2_009310	PEX2_050550	A0A0A2I3G5	A0A0A2IYH8	ATPase, AAA-type, core; Belongs to the AAA ATPase family.	Winged helix-turn-helix transcription repressor DNA-binding.	0.999
PEX2_009310	PEX2_057010	A0A0A2I3G5	A0A0A2IAX5	ATPase, AAA-type, core; Belongs to the AAA ATPase family.	Proteasome subunit beta.	0.999
PEX2_009310	PEX2_068620	A0A0A2I3G5	A0A0A2IRF9	ATPase, AAA-type, core; Belongs to the AAA ATPase family.	VWFA domain-containing protein.	0.999
PEX2_009310	PEX2_093930	A0A0A2I3G5	A0A0A2J3T6	ATPase, AAA-type, core; Belongs to the AAA ATPase family.	JAB1/Mov34/MPN/PAD-1.	0.999
PEX2_009310	PEX2_106310	A0A0A2I3G5	A0A0A2IB54	ATPase, AAA-type, core; Belongs to the AAA ATPase family.	JAB1/Mov34/MPN/PAD-1.	0.999
PEX2_010120	PEX2_009310	A0A0A2I973	A0A0A2I3G5	26S proteasome complex ubiquitin receptor, subunit Rpn13.	ATPase, AAA-type, core; Belongs to the AAA ATPase family.	0.998
PEX2_010120	PEX2_024910	A0A0A2I973	A0A0A2JF16	26S proteasome complex ubiquitin receptor, subunit Rpn13.	PCI/PINT associated module.	0.995
PEX2_010120	PEX2_026310	A0A0A2I973	A0A0A2KEW0	26S proteasome complex ubiquitin receptor, subunit Rpn13.	Proteasome subunit alpha type.	0.981
PEX2_010120	PEX2_039760	A0A0A2I973	A0A0A2JFU0	26S proteasome complex ubiquitin receptor, subunit Rpn13.	Ubiquitin carboxyl-terminal hydrolase.	0.975
PEX2_010120	PEX2_047980	A0A0A2I973	A0A0A2KM70	26S proteasome complex ubiquitin receptor, subunit Rpn13.	26S proteasome non-ATPase regulatory subunit Rpn12.	0.994
PEX2_010120	PEX2_050550	A0A0A2I973	A0A0A2IYH8	26S proteasome complex ubiquitin receptor, subunit Rpn13.	Winged helix-turn-helix transcription repressor DNA-binding.	0.992
PEX2_010120	PEX2_057010	A0A0A2I973	A0A0A2IAX5	26S proteasome complex ubiquitin receptor, subunit Rpn13.	Proteasome subunit beta.	0.976
PEX2_010120	PEX2_068620	A0A0A2I973	A0A0A2IRF9	26S proteasome complex ubiquitin receptor, subunit Rpn13.	VWFA domain-containing protein.	0.998
PEX2_010120	PEX2_093930	A0A0A2I973	A0A0A2J3T6	26S proteasome complex ubiquitin receptor, subunit Rpn13.	JAB1/Mov34/MPN/PAD-1.	0.994
PEX2_010120	PEX2_106310	A0A0A2I973	A0A0A2IB54	26S proteasome complex ubiquitin receptor, subunit Rpn13.	JAB1/Mov34/MPN/PAD-1.	0.995