STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_038000Aldolase-type TIM barrel; Belongs to the DapA family. (312 aa)    
Predicted Functional Partners:
PEX2_075380
Pyridoxal phosphate-dependent transferase, major region, subdomain 2.
   
 
 0.891
PEX2_064330
Aspartate aminotransferase.
   
 0.890
PEX2_054750
Aspartate aminotransferase.
   
  0.889
PEX2_091570
Aspartate aminotransferase.
   
  0.889
PEX2_075030
Pyridoxal phosphate-dependent transferase, major region, subdomain 2.
   
  0.888
PEX2_088580
D-amino-acid oxidase.
   
 
  0.886
PEX2_033180
D-amino-acid oxidase.
   
 
  0.886
PEX2_022530
Malate synthase; Belongs to the malate synthase family.
   
 
 0.883
PEX2_103690
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.882
PEX2_012880
Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family.
   
 0.882
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.