STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_009770Uncharacterized protein. (1095 aa)    
Predicted Functional Partners:
PEX2_067120
Uncharacterized protein.
   
 
  0.977
PEX2_087330
Helicase, C-terminal; Belongs to the helicase family. Dicer subfamily.
   
 0.935
PEX2_080130
Helicase, C-terminal; Belongs to the helicase family. Dicer subfamily.
   
 0.935
PEX2_034030
Ribonuclease III.
    
 0.843
PEX2_053330
RNase III domain-containing protein.
    
 0.816
PEX2_053260
Uncharacterized protein.
    
 0.816
PEX2_061950
Double-stranded RNA-binding.
    
 0.806
PEX2_005630
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.777
PEX2_094670
Armadillo-like helical.
    
 0.768
PEX2_081480
Translin, C-terminal.
    
 0.767
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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