STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_029390Homogentisate 1,2-dioxygenase. (489 aa)    
Predicted Functional Partners:
PEX2_081930
4-hydroxyphenylpyruvate dioxygenase.
  
 0.977
PEX2_091950
4-hydroxyphenylpyruvate dioxygenase.
  
 0.977
PEX2_091990
Glutathione S-transferase/chloride channel, C-terminal; Belongs to the GST superfamily.
  
 
 0.953
PEX2_008640
4-hydroxyphenylpyruvate dioxygenase.
  
 0.930
PEX2_101280
AP_endonuc_2 domain-containing protein.
     
 0.885
PEX2_063570
AP_endonuc_2 domain-containing protein.
     
 0.885
PEX2_091970
Homogentisate 1,2-dioxygenase.
  
  
 
0.884
PEX2_091980
Fumarylacetoacetase.
 
 
 0.873
PEX2_024100
AP_endonuc_2 domain-containing protein.
     
 0.848
PEX2_080590
AP_endonuc_2 domain-containing protein.
     
 0.843
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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