PEX2_068340 protein (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PEX2_068340

Phosphatidylethanolamine-binding protein PEBP. (276 aa)

Predicted Functional Partners:

PEX2_068350

0.945

PEX2_103340

0.772

PEX2_099360

0.762

PEX2_106400

0.751

PEX2_024360

0.751

PEX2_076030

0.748

PEX2_008770

0.747

PEX2_087780

0.732

PEX2_097390

0.728

PEX2_026570

0.727

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_008770	PEX2_026570	A0A0A2KBJ8	A0A0A2K8W3	Ribosomal protein L28/L40, mitochondrial.	S15/NS1, RNA-binding; Belongs to the universal ribosomal protein uS15 family.	0.969
PEX2_008770	PEX2_068340	A0A0A2KBJ8	A0A0A2JSD4	Ribosomal protein L28/L40, mitochondrial.	Phosphatidylethanolamine-binding protein PEBP.	0.747
PEX2_008770	PEX2_076030	A0A0A2KBJ8	A0A0A2JWW6	Ribosomal protein L28/L40, mitochondrial.	Ribosomal protein S23/S29, mitochondrial.	0.980
PEX2_008770	PEX2_087780	A0A0A2KBJ8	A0A0A2K0I1	Ribosomal protein L28/L40, mitochondrial.	Ribosomal protein S5, C-terminal; Belongs to the universal ribosomal protein uS5 family.	0.967
PEX2_008770	PEX2_097390	A0A0A2KBJ8	A0A0A2IK01	Ribosomal protein L28/L40, mitochondrial.	Ribosomal protein L4/L1e.	0.986
PEX2_008770	PEX2_099360	A0A0A2KBJ8	A0A0A2I2P3	Ribosomal protein L28/L40, mitochondrial.	Ribosomal protein S2, bacteria/mitochondria/plastid.	0.969
PEX2_008770	PEX2_103340	A0A0A2KBJ8	A0A0A2IXY7	Ribosomal protein L28/L40, mitochondrial.	Nucleic acid-binding, OB-fold.	0.957
PEX2_024360	PEX2_068340	A0A0A2JEV0	A0A0A2JSD4	14-3-3 protein; Belongs to the 14-3-3 family.	Phosphatidylethanolamine-binding protein PEBP.	0.751
PEX2_024360	PEX2_103340	A0A0A2JEV0	A0A0A2IXY7	14-3-3 protein; Belongs to the 14-3-3 family.	Nucleic acid-binding, OB-fold.	0.459
PEX2_024360	PEX2_106400	A0A0A2JEV0	A0A0A2IB60	14-3-3 protein; Belongs to the 14-3-3 family.	14-3-3 protein; Belongs to the 14-3-3 family.	0.881
PEX2_026570	PEX2_008770	A0A0A2K8W3	A0A0A2KBJ8	S15/NS1, RNA-binding; Belongs to the universal ribosomal protein uS15 family.	Ribosomal protein L28/L40, mitochondrial.	0.969
PEX2_026570	PEX2_068340	A0A0A2K8W3	A0A0A2JSD4	S15/NS1, RNA-binding; Belongs to the universal ribosomal protein uS15 family.	Phosphatidylethanolamine-binding protein PEBP.	0.727
PEX2_026570	PEX2_076030	A0A0A2K8W3	A0A0A2JWW6	S15/NS1, RNA-binding; Belongs to the universal ribosomal protein uS15 family.	Ribosomal protein S23/S29, mitochondrial.	0.999
PEX2_026570	PEX2_087780	A0A0A2K8W3	A0A0A2K0I1	S15/NS1, RNA-binding; Belongs to the universal ribosomal protein uS15 family.	Ribosomal protein S5, C-terminal; Belongs to the universal ribosomal protein uS5 family.	0.999
PEX2_026570	PEX2_097390	A0A0A2K8W3	A0A0A2IK01	S15/NS1, RNA-binding; Belongs to the universal ribosomal protein uS15 family.	Ribosomal protein L4/L1e.	0.998
PEX2_026570	PEX2_099360	A0A0A2K8W3	A0A0A2I2P3	S15/NS1, RNA-binding; Belongs to the universal ribosomal protein uS15 family.	Ribosomal protein S2, bacteria/mitochondria/plastid.	0.999
PEX2_026570	PEX2_103340	A0A0A2K8W3	A0A0A2IXY7	S15/NS1, RNA-binding; Belongs to the universal ribosomal protein uS15 family.	Nucleic acid-binding, OB-fold.	0.996
PEX2_068340	PEX2_008770	A0A0A2JSD4	A0A0A2KBJ8	Phosphatidylethanolamine-binding protein PEBP.	Ribosomal protein L28/L40, mitochondrial.	0.747
PEX2_068340	PEX2_024360	A0A0A2JSD4	A0A0A2JEV0	Phosphatidylethanolamine-binding protein PEBP.	14-3-3 protein; Belongs to the 14-3-3 family.	0.751
PEX2_068340	PEX2_026570	A0A0A2JSD4	A0A0A2K8W3	Phosphatidylethanolamine-binding protein PEBP.	S15/NS1, RNA-binding; Belongs to the universal ribosomal protein uS15 family.	0.727