STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_093420Phenylalanyl-tRNA synthetase. (514 aa)    
Predicted Functional Partners:
PEX2_036210
tRNA synthetase, B5-domain.
  
 0.999
PEX2_037130
Phenylalanyl-tRNA synthetase, class IIc, alpha subunit.
   
 
0.920
PEX2_021550
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
 
 0.829
PEX2_062670
Nucleic acid-binding, OB-fold.
  
  
 0.774
PEX2_042910
Ribosomal protein S5/S7, eukaryotic/archaeal; Belongs to the universal ribosomal protein uS7 family.
   
  
 0.771
PEX2_062540
Tyrosine--tRNA ligase.
  
  
 0.760
PEX2_009820
Aminoacyl-tRNA synthetase, class II.
   
 
 0.759
PEX2_079050
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.746
PEX2_059660
Aminoacyl-tRNA synthetase, class II.
   
 
 0.743
PEX2_077240
Methyltransferase type 11.
 
 
   0.738
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.