STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_054400Zinc finger, PHD-finger. (295 aa)    
Predicted Functional Partners:
PEX2_000360
Histone-binding protein RBBP4.
   
 0.917
PEX2_037310
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.861
PEX2_106320
Histone deacetylase superfamily.
    
 0.861
PEX2_011470
Sin3 associated polypeptide p18.
    
 0.754
PEX2_081900
MRG domain-containing protein.
    
 0.743
PEX2_079940
Uncharacterized protein; Belongs to the actin family.
    
 0.736
PEX2_008340
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.734
PEX2_110520
RNA polymerase, subunit omega/K/RPABC2.
    
 0.720
PEX2_070930
Histone H2A; Belongs to the histone H2A family.
    
 0.684
PEX2_020620
Histone H4 acetyltransferase, NuA4 complex, Eaf6.
    
 0.683
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.