STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_034320Fumarylacetoacetase, C-terminal-like protein. (287 aa)    
Predicted Functional Partners:
PEX2_029390
Homogentisate 1,2-dioxygenase.
  
 
 0.701
PEX2_091970
Homogentisate 1,2-dioxygenase.
  
 
 0.701
PEX2_055920
Alpha/beta hydrolase fold-1.
 
 
  0.666
PEX2_001410
Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3.
  
 
  0.646
PEX2_022530
Malate synthase; Belongs to the malate synthase family.
    
 0.617
PEX2_091980
Fumarylacetoacetase.
     
 0.607
PEX2_016850
Aldehyde dehydrogenase, C-terminal; Belongs to the aldehyde dehydrogenase family.
   
  0.565
PEX2_072470
Dimeric alpha-beta barrel.
   
  0.565
PEX2_030100
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.565
PEX2_077040
Aldehyde dehydrogenase, C-terminal; Belongs to the aldehyde dehydrogenase family.
   
  0.565
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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