STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_001690Uncharacterized protein. (327 aa)    
Predicted Functional Partners:
PEX2_001260
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.998
PEX2_081990
Small-subunit processome, Utp12.
   
 
 0.983
PEX2_071740
Small-subunit processome, Utp14.
   
 
 0.968
PEX2_005730
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.962
PEX2_042820
Helicase, C-terminal.
   
 0.961
PEX2_108380
Nop14-like protein.
   
 
 0.932
PEX2_010150
Sas10/Utp3/C1D.
   
 
 0.931
PEX2_036450
KRR1 interacting protein 1.
   
 
 0.918
PEX2_024920
Sof1-like protein.
   
  0.918
PEX2_093200
WD_REPEATS_REGION domain-containing protein.
   
 
 0.917
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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