STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_085820Helicase, C-terminal; Belongs to the DEAD box helicase family. (488 aa)    
Predicted Functional Partners:
PEX2_014120
Nuclear pore complex protein.
    
 
 0.988
PEX2_010240
Uncharacterized protein.
    
 
 0.966
PEX2_001140
PARP catalytic domain-containing protein.
    
 
 0.856
PEX2_029220
Uncharacterized protein.
    
 
 0.856
PEX2_110310
Nuclear transport factor 2, Eukaryote.
    
 
 0.792
PEX2_019180
Helicase, C-terminal; Belongs to the DEAD box helicase family.
  
0.791
PEX2_023910
Uncharacterized protein.
   
 0.741
PEX2_091710
Helicase, C-terminal.
  
0.698
PEX2_049140
Armadillo-like helical.
    
 
 0.688
PEX2_037570
Helicase, C-terminal; Belongs to the DEAD box helicase family.
  
 
0.663
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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