Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PEX2_000360 | PEX2_017130 | A0A0A2KXA2 | A0A0A2K260 | Histone-binding protein RBBP4. | DeoxyUTP pyrophosphatase. | 0.685 |
PEX2_000360 | PEX2_033700 | A0A0A2KXA2 | A0A0A2JZV0 | Histone-binding protein RBBP4. | Histone-fold. | 0.685 |
PEX2_000360 | PEX2_047570 | A0A0A2KXA2 | A0A0A2IBH0 | Histone-binding protein RBBP4. | Uncharacterized protein. | 0.967 |
PEX2_000360 | PEX2_066190 | A0A0A2KXA2 | A0A0A2K2J7 | Histone-binding protein RBBP4. | Uncharacterized protein. | 0.673 |
PEX2_000360 | PEX2_084550 | A0A0A2KXA2 | A0A0A2JBK4 | Histone-binding protein RBBP4. | Uncharacterized protein. | 0.685 |
PEX2_010850 | PEX2_016940 | A0A0A2KST9 | A0A0A2K4G7 | Nucleic acid-binding, OB-fold. | Helicase, C-terminal. | 0.783 |
PEX2_010850 | PEX2_066190 | A0A0A2KST9 | A0A0A2K2J7 | Nucleic acid-binding, OB-fold. | Uncharacterized protein. | 0.780 |
PEX2_010850 | PEX2_091620 | A0A0A2KST9 | A0A0A2JTP9 | Nucleic acid-binding, OB-fold. | DNA repair protein. | 0.915 |
PEX2_010850 | PEX2_108620 | A0A0A2KST9 | A0A0A2JC73 | Nucleic acid-binding, OB-fold. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.999 |
PEX2_016940 | PEX2_010850 | A0A0A2K4G7 | A0A0A2KST9 | Helicase, C-terminal. | Nucleic acid-binding, OB-fold. | 0.783 |
PEX2_016940 | PEX2_066190 | A0A0A2K4G7 | A0A0A2K2J7 | Helicase, C-terminal. | Uncharacterized protein. | 0.676 |
PEX2_016940 | PEX2_091620 | A0A0A2K4G7 | A0A0A2JTP9 | Helicase, C-terminal. | DNA repair protein. | 0.904 |
PEX2_016940 | PEX2_093610 | A0A0A2K4G7 | A0A0A2JW00 | Helicase, C-terminal. | Nucleic acid-binding, OB-fold. | 0.783 |
PEX2_016940 | PEX2_108620 | A0A0A2K4G7 | A0A0A2JC73 | Helicase, C-terminal. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.974 |
PEX2_017130 | PEX2_000360 | A0A0A2K260 | A0A0A2KXA2 | DeoxyUTP pyrophosphatase. | Histone-binding protein RBBP4. | 0.685 |
PEX2_017130 | PEX2_066190 | A0A0A2K260 | A0A0A2K2J7 | DeoxyUTP pyrophosphatase. | Uncharacterized protein. | 0.556 |
PEX2_033700 | PEX2_000360 | A0A0A2JZV0 | A0A0A2KXA2 | Histone-fold. | Histone-binding protein RBBP4. | 0.685 |
PEX2_033700 | PEX2_066190 | A0A0A2JZV0 | A0A0A2K2J7 | Histone-fold. | Uncharacterized protein. | 0.556 |
PEX2_047570 | PEX2_000360 | A0A0A2IBH0 | A0A0A2KXA2 | Uncharacterized protein. | Histone-binding protein RBBP4. | 0.967 |
PEX2_047570 | PEX2_066190 | A0A0A2IBH0 | A0A0A2K2J7 | Uncharacterized protein. | Uncharacterized protein. | 0.602 |
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