STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_0278803,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. (234 aa)    
Predicted Functional Partners:
PEX2_089860
Riboflavin synthase-like beta-barrel.
 0.997
PEX2_051370
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
 
 
 0.993
PEX2_061240
GTP cyclohydrolase II, RibA.
 
   
 0.970
PEX2_008060
Snf7.
 
      0.874
PEX2_089330
Coronin; Belongs to the WD repeat coronin family.
  
 0.825
PEX2_046680
PH domain-containing protein.
  
 0.825
PEX2_000930
Nucleoside diphosphate kinase.
  
 0.777
PEX2_083140
Riboflavin kinase domain, bacterial/eukaryotic.
    
 0.773
PEX2_052400
Bacterial bifunctional deaminase-reductase, C-terminal.
 
  
 0.770
PEX2_067630
Bacterial bifunctional deaminase-reductase, C-terminal.
 
  
 0.763
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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