STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_052510Ubiquitin fusion degradation protein UFD1. (766 aa)    
Predicted Functional Partners:
PEX2_016830
Putative NPL4, zinc-binding.
   
 0.980
PEX2_015510
UBX domain-containing protein.
    
 0.975
PEX2_072900
Uncharacterized protein.
   
 
 0.937
PEX2_057390
Zinc finger, RING/FYVE/PHD-type.
    
 
 0.937
PEX2_019300
Ovarian tumor, otubain.
   
 
 0.933
PEX2_012810
UBX domain-containing protein.
    
 
 0.931
PEX2_103910
Uncharacterized protein.
    
 
 0.900
PEX2_046090
Ubiquitin supergroup.
   
 0.884
PEX2_061350
Zinc finger, AN1-type.
   
 0.884
PEX2_068620
VWFA domain-containing protein.
   
 
 0.883
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.