STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_048470Cupin 2, conserved barrel. (230 aa)    
Predicted Functional Partners:
PEX2_050580
WD_REPEATS_REGION domain-containing protein.
   
 0.676
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.652
PEX2_063430
Armadillo-like helical.
   
 0.601
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.595
PEX2_072230
Myosin tail; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.552
PEX2_075760
Uncharacterized protein.
    
  0.534
PEX2_072930
Alpha-actinin.
    
 0.532
PEX2_102590
PAK-box/P21-Rho-binding.
    
 0.532
PEX2_100670
CP-type G domain-containing protein.
   
  0.531
PEX2_078060
Pre-mRNA cleavage complex II Clp1.
   
  0.530
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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