STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_008770Ribosomal protein L28/L40, mitochondrial. (189 aa)    
Predicted Functional Partners:
PEX2_042040
Ribosomal protein L46.
   
 
 0.995
PEX2_043830
Ribosomal protein L19.
   
 
 0.992
PEX2_049260
Ribosomal protein L32p.
   
   0.991
PEX2_108740
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.991
PEX2_072880
Ribosomal protein S16.
   
 
 0.989
PEX2_071730
Uncharacterized protein.
   
 
 0.989
PEX2_019220
Ribosomal protein L13, bacterial-type.
   
 
 0.988
PEX2_001590
Ribosomal protein L47, mitochondrial.
   
 
 0.987
PEX2_097390
Ribosomal protein L4/L1e.
   
 
 0.986
PEX2_064270
Ribosomal protein L30, bacterial-type.
   
 
 0.986
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.