STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_047360Vps8 domain-containing protein. (1602 aa)    
Predicted Functional Partners:
PEX2_030140
E3 ubiquitin-protein ligase PEP5.
    
 
 0.989
PEX2_002270
Pep3/Vps18/deep orange.
    
 
 0.989
PEX2_003210
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.980
PEX2_012750
Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2.
   
 
 0.950
PEX2_102000
Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1.
   
 
 0.948
PEX2_033450
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 
 0.946
PEX2_017320
Uncharacterized protein family UPF0311.
    
 
 0.937
PEX2_079670
Small GTPase superfamily, Ras type.
    
 
 0.750
PEX2_077220
Small GTPase superfamily.
    
 
 0.750
PEX2_108670
Small GTPase superfamily, Ras type.
    
 
 0.750
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.