Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PEX2_005630 | PEX2_015080 | A0A0A2L1S1 | A0A0A2ID88 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | mRNA cap guanine-N7 methyltransferase. | 0.811 |
| PEX2_005630 | PEX2_020830 | A0A0A2L1S1 | A0A0A2INM0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase II, Rpb4, core. | 0.999 |
| PEX2_005630 | PEX2_038860 | A0A0A2L1S1 | A0A0A2KCD2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Nucleic acid-binding, OB-fold. | 0.999 |
| PEX2_005630 | PEX2_046780 | A0A0A2L1S1 | A0A0A2K4M9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Nuclear cap-binding protein subunit 2. | 0.785 |
| PEX2_005630 | PEX2_062890 | A0A0A2L1S1 | A0A0A2JGA3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.996 |
| PEX2_005630 | PEX2_062970 | A0A0A2L1S1 | A0A0A2KSZ3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | mRNA_triPase domain-containing protein. | 0.688 |
| PEX2_005630 | PEX2_070680 | A0A0A2L1S1 | A0A0A2JQJ3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SANT domain-containing protein. | 0.458 |
| PEX2_005630 | PEX2_083590 | A0A0A2L1S1 | A0A0A2KPF5 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. | 0.972 |
| PEX2_005630 | PEX2_093480 | A0A0A2L1S1 | A0A0A2HZW9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, dimerization. | 0.999 |
| PEX2_015080 | PEX2_005630 | A0A0A2ID88 | A0A0A2L1S1 | mRNA cap guanine-N7 methyltransferase. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.811 |
| PEX2_015080 | PEX2_038860 | A0A0A2ID88 | A0A0A2KCD2 | mRNA cap guanine-N7 methyltransferase. | Nucleic acid-binding, OB-fold. | 0.742 |
| PEX2_015080 | PEX2_046780 | A0A0A2ID88 | A0A0A2K4M9 | mRNA cap guanine-N7 methyltransferase. | Nuclear cap-binding protein subunit 2. | 0.759 |
| PEX2_015080 | PEX2_062890 | A0A0A2ID88 | A0A0A2JGA3 | mRNA cap guanine-N7 methyltransferase. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.992 |
| PEX2_015080 | PEX2_062970 | A0A0A2ID88 | A0A0A2KSZ3 | mRNA cap guanine-N7 methyltransferase. | mRNA_triPase domain-containing protein. | 0.539 |
| PEX2_015080 | PEX2_083590 | A0A0A2ID88 | A0A0A2KPF5 | mRNA cap guanine-N7 methyltransferase. | mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. | 0.869 |
| PEX2_015080 | PEX2_093480 | A0A0A2ID88 | A0A0A2HZW9 | mRNA cap guanine-N7 methyltransferase. | DNA-directed RNA polymerase, dimerization. | 0.794 |
| PEX2_020830 | PEX2_005630 | A0A0A2INM0 | A0A0A2L1S1 | RNA polymerase II, Rpb4, core. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| PEX2_020830 | PEX2_038860 | A0A0A2INM0 | A0A0A2KCD2 | RNA polymerase II, Rpb4, core. | Nucleic acid-binding, OB-fold. | 0.999 |
| PEX2_020830 | PEX2_046780 | A0A0A2INM0 | A0A0A2K4M9 | RNA polymerase II, Rpb4, core. | Nuclear cap-binding protein subunit 2. | 0.729 |
| PEX2_020830 | PEX2_062890 | A0A0A2INM0 | A0A0A2JGA3 | RNA polymerase II, Rpb4, core. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.996 |
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