PEX2_056610 protein (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PEX2_056610

T5orf172 domain-containing protein. (454 aa)

Predicted Functional Partners:

PEX2_020960

0.842

PEX2_081290

0.842

PEX2_004440

0.799

PEX2_060050

0.781

PEX2_094630

0.771

PEX2_076710

0.771

PEX2_077950

0.742

PEX2_106950

0.742

PEX2_039780

0.742

PEX2_070540

0.742

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_004440	PEX2_020960	A0A0A2JNX9	A0A0A2K0K3	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	FMN-binding split barrel-like protein.	0.926
PEX2_004440	PEX2_039780	A0A0A2JNX9	A0A0A2JFW5	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Cyanovirin-N.	0.823
PEX2_004440	PEX2_056610	A0A0A2JNX9	A0A0A2KS47	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	T5orf172 domain-containing protein.	0.799
PEX2_004440	PEX2_060050	A0A0A2JNX9	A0A0A2JFE5	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Heat shock protein 70 family.	0.919
PEX2_004440	PEX2_070540	A0A0A2JNX9	A0A0A2JGW0	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Cyanovirin-N.	0.823
PEX2_004440	PEX2_076710	A0A0A2JNX9	A0A0A2JQD1	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Heat shock protein 70 family.	0.992
PEX2_004440	PEX2_077950	A0A0A2JNX9	A0A0A2IIA3	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	0.921
PEX2_004440	PEX2_081290	A0A0A2JNX9	A0A0A2KA97	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Heat shock protein Hsp90, N-terminal.	0.926
PEX2_004440	PEX2_094630	A0A0A2JNX9	A0A0A2IE62	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Chaperone DnaK; Belongs to the heat shock protein 70 family.	0.847
PEX2_004440	PEX2_106950	A0A0A2JNX9	A0A0A2J0A2	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.823
PEX2_020960	PEX2_004440	A0A0A2K0K3	A0A0A2JNX9	FMN-binding split barrel-like protein.	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	0.926
PEX2_020960	PEX2_039780	A0A0A2K0K3	A0A0A2JFW5	FMN-binding split barrel-like protein.	Cyanovirin-N.	0.906
PEX2_020960	PEX2_056610	A0A0A2K0K3	A0A0A2KS47	FMN-binding split barrel-like protein.	T5orf172 domain-containing protein.	0.842
PEX2_020960	PEX2_060050	A0A0A2K0K3	A0A0A2JFE5	FMN-binding split barrel-like protein.	Heat shock protein 70 family.	0.939
PEX2_020960	PEX2_070540	A0A0A2K0K3	A0A0A2JGW0	FMN-binding split barrel-like protein.	Cyanovirin-N.	0.906
PEX2_020960	PEX2_076710	A0A0A2K0K3	A0A0A2JQD1	FMN-binding split barrel-like protein.	Heat shock protein 70 family.	0.913
PEX2_020960	PEX2_077950	A0A0A2K0K3	A0A0A2IIA3	FMN-binding split barrel-like protein.	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	0.950
PEX2_020960	PEX2_094630	A0A0A2K0K3	A0A0A2IE62	FMN-binding split barrel-like protein.	Chaperone DnaK; Belongs to the heat shock protein 70 family.	0.926
PEX2_020960	PEX2_106950	A0A0A2K0K3	A0A0A2J0A2	FMN-binding split barrel-like protein.	Uncharacterized protein.	0.906
PEX2_039780	PEX2_004440	A0A0A2JFW5	A0A0A2JNX9	Cyanovirin-N.	Heat shock protein 70 family; Belongs to the heat shock protein 70 family.	0.823