STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2R0X2Glucoamylase. (594 aa)    
Predicted Functional Partners:
A0A0H2SPR5
Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.
  
 0.983
A0A0H2RXG2
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.967
A0A0H2S6E1
60S ribosomal protein L5.
  
 
 0.967
A0A0H2SEY2
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.967
A0A0H2RBW0
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.963
A0A0H2RWK6
60S ribosomal protein L17/L23; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.959
A0A0H2RJ23
Ribosomal protein L24.
  
 
 0.958
A0A0H2RY81
Ribosomal protein L32e.
  
   0.956
A0A0H2RRU6
Ribosomal protein L35.
  
   0.952
A0A0H2RDL3
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
  
 0.950
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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