STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2RIH5AAA family ATPase. (784 aa)    
Predicted Functional Partners:
A0A0H2RLA4
Proliferation-associated protein 1.
   
 0.971
A0A0H2RRF6
TRASH domain-containing protein.
   
 
 0.930
A0A0H2S8I1
Thioredoxin-domain-containing protein.
    
 0.918
A0A0H2RRJ9
SEP-domain-containing protein.
   
 0.909
A0A0H2RW14
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.905
A0A0H2RYU7
VWFA domain-containing protein.
   
 0.904
A0A0H2S4M7
C2H2-type domain-containing protein.
   
 
 0.904
A0A0H2RR21
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.903
A0A0H2S8C6
Polyubiquitin-tagged protein recognition complex, Npl4 component.
   
 0.901
A0A0H2RJU1
UFD1-domain-containing protein.
    
 0.898
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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