STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2RKM3Cap64 protein. (563 aa)    
Predicted Functional Partners:
A0A0H2RQG4
CAP10 domain-containing protein.
 
  
 0.829
A0A0H2RDS3
Capsular associated protein.
 
     0.706
A0A0H2RIQ6
Uncharacterized protein.
  
     0.478
A0A0H2RJS6
Uncharacterized protein.
  
     0.478
A0A0H2RXQ7
Uncharacterized protein.
  
     0.453
A0A0H2RQW9
Uncharacterized protein.
  
     0.413
A0A0H2RE91
Uncharacterized protein.
  
     0.406
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.