STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2RKV7Beach-domain-containing protein. (2012 aa)    
Predicted Functional Partners:
A0A0H2RX09
Galactose oxidase.
    
 0.878
A0A0H2S780
DNase I-like protein.
     
 0.828
A0A0H2S966
Ribose-5-phosphate isomerase.
     
 0.780
A0A0H2RQ38
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
 0.779
A0A0H2RYU8
FYVE-type domain-containing protein.
     
 0.755
A0A0H2RQY4
APG6-domain-containing protein.
    
 
 0.743
A0A0H2RSW2
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
   
 
  0.741
A0A0H2SEG0
G-protein complex beta subunit.
    
 0.725
A0A0H2RZ66
Ras-domain-containing protein.
    
 0.719
A0A0H2RCZ0
Autophagy-related protein.
    
 
 0.705
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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