STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2RM443-hydroxy-3-methylglutaryl coenzyme A reductase. (1342 aa)    
Predicted Functional Partners:
A0A0H2RI79
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.989
A0A0H2S8Q2
Uncharacterized protein.
   
 
 0.931
A0A0H2S346
RING-type domain-containing protein.
   
 
 0.922
A0A0H2RQJ1
Diphosphomevalonate decarboxylase.
  
 
 0.909
A0A0H2RNG1
Squalene epoxidase.
   
  
 0.838
A0A0H2SUE2
SE-domain-containing protein.
   
  
 0.838
A0A0H2RU70
Terpenoid synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.829
A0A0H2RZY6
BHLH domain-containing protein.
     
 0.791
A0A0H2REN0
Importin N-terminal domain-containing protein.
    
 
 0.790
A0A0H2RXC0
RING-type domain-containing protein.
   
 
 0.785
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
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