STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0H2RPA2Casein kinase I; Belongs to the protein kinase superfamily. (350 aa)    
Predicted Functional Partners:
A0A0H2S905
Low temperature viability protein.
    
 0.967
A0A0H2R154
Cell adhesion protein byn-1.
    
 0.908
A0A0H2S7I9
RIO1-domain-containing protein.
    
 0.908
A0A0H2RQH2
DUF663-domain-containing protein.
    
 0.904
A0A0H2RXL3
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
    
 0.888
A0A0H2RSU0
WD40 repeat-like protein.
   
 0.887
A0A0H2RSX9
WD40 repeat-like protein.
   
 0.887
A0A0H2SEY2
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.887
A0A0H2RHI7
Cryptochrome.
    
 0.877
A0A0H2RTQ3
Photolyase/cryptochrome alpha/beta domain-containing protein.
    
 0.877
Your Current Organism:
Schizopora paradoxa
NCBI taxonomy Id: 27342
Other names: Hyphodontia paradoxa, S. paradoxa
Server load: low (18%) [HD]